huang-sh/scanpy-mcp

@huang-sh

MCP server for Scanpy enabling scRNA-Seq analysis with natural language

scanpyscrna-seqbioinformaticssingle-cellrna-seqmcpnatural-languageanalysistool

Installation & Configuration

{
  "mcpServers": {
    "scanpy-mcp": {
      "command": "scanpy-mcp",
      "args": [
        "run"
      ]
    }
  }
}

Transport

stdiostreamable-http

Language

Python

Created

2026/6/13

Updated

2026/6/13

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